{visual} R# Documentation

visual


require(mzkit);

#' Mass spectrum data visualization
imports "visual" from "mzplot";

Mass spectrum data visualization



.NET clr function exports
plot.ionchromatogram IonChromatogram:

the raw data

plot.rtshift RtShift:

the rt shift result

plot.alignmentoutput AlignmentOutput:

the spectrum similarity comparision result object

plot.peakset PeakSet:

A collection of the xcms2 peak features data

plot.chromatogram2dscan Chromatogram2DScan:
plot.chromatogramoverlap ChromatogramOverlap:
plot.mzpack mzPack:

the unify in-memory data model of the mzkit MS data model. (mzPack文件格式模型)

plot.chromatogram2dscan Chromatogram2DScan:
plot.chromatogramtick ChromatogramTick:

The chromatogram signal ticks ({time => intensity})

plot.chromatogram Chromatogram:

A data union model of TIC/BPC

plot.generalsignal GeneralSignal:
plot.generalsignal GeneralSignal:
plot.object any kind:
gcxgc_heatmap
raw_scatter

plot raw scatter matrix based on a given sequence of ms1 scans data

raw_snapshot3D

plot raw XIC matrix based on a given sequence of ms1 scans data

parse.spectrum_alignment
mass_spectrum.plot

Plot of the mass spectrum

plot.UV_signals

visual of the UV spectrum

plotNetworkClusterHistogram

Plot cluster size histogram on RT dimension

xic_scatter_density

make visualization of the XIC scatters


[Document Index]