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MSImaging Demo
Kidney multiple ions ms-imaging

A mouse kidney ms-imaging from the PANOMIX lab, this ion matrix heatmap plot shows the spatial expression of 9 metabolites on the kidney tissue.

Spatial single cell metabolomics
Spatial single cell metabolomics

Another mouse kidney single-cell ms-imaging tissue morphology result from the PANOMIX BioDeep R&D lab.
The tissue was scan by the Thermofisher QE+ combine with the AP-MALDI ion source to obtain the single-cell metabolomics data. The single cell raw data was deconvolution to a high dimensional cubic matrix and then do auto segmentation to obtain the tissue regions.
Tissue region Class_7 is marked as a tumor region and confirmed via the HE stain analysis.

Multiple region stat plot
Multiple region stat plot

The sample data of each ions on the tissue specimen sample is sampling based on some specific statistics method, and then we apply the statistics analysis to found out the metabolite expression difference between each tissue regions which is extract from the single cell metabolomics data.

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