MSI_summary.scaleMax {MsImaging} R Documentation

Get the max intensity value via TrIQ or quantile cutoff

Description

Usage

MSI_summary.scaleMax(data, intensity,
    qcut = 0.75,
    TrIQ = TRUE);

Arguments

data

the MSI plot data. [as MSISummary]

intensity

the intensity source which describ how to extract the intensity data from the given MSI plot data. [as IntensitySummary]

qcut

the threshold cutoff value for the cutoff algorithm. [as double]

TrIQ

used the TrIQ cutoff algorithm or quantile cutoff? default parameter value TRUE means use the TrIQ method by default. [as boolean]

env

[as Environment]

Details

Authors

BioNovoGene

Value

this function returns data object of type double.

clr value class

Examples

[Package MsImaging version 1.0.0.0 Index]