| IonStat {BioNovoGene.Analytical.MassSpectrometry.MsImaging} | .NET clr documentation |
Stats the ion features inside a MSI raw data slide
# namespace BioNovoGene.Analytical.MassSpectrometry.MsImaging
export class IonStat {
# the average intensity value of current ion across all pixels
averageIntensity: double;
# the x axis position of the pixel which has the max intensity value of current ion layer
basePixelX: integer;
# the y axis position of the pixel which has the max intensity value of current ion layer
basePixelY: integer;
# the average spatial density
density: double;
entropy: double;
# the max intensity value of current ion across all pixels
maxIntensity: double;
# Moran-I index value of current ion layer geometry data
#
# In statistics, Moran's I is a measure of spatial autocorrelation developed by Patrick Alfred Pierce Moran.
# Spatial autocorrelation is characterized by a correlation in a signal among nearby locations in space.
# Spatial autocorrelation is more complex than one-dimensional autocorrelation because spatial correlation
# is multi-dimensional (i.e. 2 or 3 dimensions of space) and multi-directional.
moran: double;
# the ion m/z value of current ms-imaging layer feature
mz: double;
# the max range value of current ion m/z
mzmax: double;
# the min range value of current ion m/z
mzmin: double;
# the description text of the mz range: mzmax - mzmin
mzwidth: string;
# the total pixel number of current ion m/z occurs.
pixels: integer;
# the Moran-I test p-value
pvalue: double;
# the intensity value of quartile Q1 level(25% quantile)
Q1Intensity: double;
# the intensity value of quartile Q2 level(median value, 50% quantile)
Q2Intensity: double;
# the intensity value of quartile Q3 level(75% quantile)
Q3Intensity: double;
rsd: double;
sparsity: double;
}