PlotMSIMatrixHeatmap {MSImaging} R Documentation

Plot MS-Imaging heatmap matrix

Description

Usage

PlotMSIMatrixHeatmap(ions.data,
    layout = [3],
    colorSet = 'Jet',
    MSI.TrIQ = 0.8,
    gaussian = 3,
    size = [2000],
    canvasPadding = [300,50,50],
    cellPadding = [100,0,100],
    font.size = 27,
    filters = NULL,
    strict = TRUE,
    msi.dimension = NULL);

Arguments

ions.data

a list of MSI layers data, each element in this list should also be a list object that contains data slots: 1. type precursor type information string 2. title the ion metabolite name 3. layer the MSI ion layer data 4. mz the target ion m/z value

filters

the custom raster data filter apply for spatial heatmap rendering

Details

Authors

xieguigang

Value

This function has no value returns.

Examples

[Package MSImaging version 0.1.0 Index]